Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.51■□□□□ 0.55
HACD3Q9P035 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HACD3Q9P035 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HACD3Q9P035 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.51■□□□□ 0.55
HACD3Q9P035 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HACD3Q9P035 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 AC009102.3-201ENST00000623118 1491 ntBASIC18.51■□□□□ 0.55
HACD3Q9P035 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.51■□□□□ 0.55
HACD3Q9P035 NOC2LP2-201ENST00000407594 1944 ntBASIC18.51■□□□□ 0.55
HACD3Q9P035 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.51■□□□□ 0.55
HACD3Q9P035 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HACD3Q9P035 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.5■□□□□ 0.55
HACD3Q9P035 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
HACD3Q9P035 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.5■□□□□ 0.55
HACD3Q9P035 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.5■□□□□ 0.55
HACD3Q9P035 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.5■□□□□ 0.55
HACD3Q9P035 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.5■□□□□ 0.55
HACD3Q9P035 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.5■□□□□ 0.55
HACD3Q9P035 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.5■□□□□ 0.55
HACD3Q9P035 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.5■□□□□ 0.55
HACD3Q9P035 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.5■□□□□ 0.55
HACD3Q9P035 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.5■□□□□ 0.55
HACD3Q9P035 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HACD3Q9P035 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
HACD3Q9P035 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.49■□□□□ 0.55
HACD3Q9P035 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 AC034232.1-201ENST00000506026 1064 ntBASIC18.49■□□□□ 0.55
HACD3Q9P035 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 MIR3917-201ENST00000580971 93 ntBASIC18.49■□□□□ 0.55
HACD3Q9P035 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.49■□□□□ 0.55
HACD3Q9P035 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HACD3Q9P035 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HACD3Q9P035 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.49■□□□□ 0.55
HACD3Q9P035 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.48■□□□□ 0.55
HACD3Q9P035 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HACD3Q9P035 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HACD3Q9P035 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
HACD3Q9P035 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HACD3Q9P035 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HACD3Q9P035 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.48■□□□□ 0.55
HACD3Q9P035 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HACD3Q9P035 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HACD3Q9P035 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
HACD3Q9P035 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.48■□□□□ 0.55
HACD3Q9P035 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HACD3Q9P035 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.48■□□□□ 0.55
HACD3Q9P035 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.48■□□□□ 0.55
HACD3Q9P035 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms