Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 AP003041.3-201ENST00000527151 707 ntBASIC17.05■□□□□ 0.32
RLIMQ9NVW2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 AC034236.2-201ENST00000606662 1610 ntBASIC17.05■□□□□ 0.32
RLIMQ9NVW2 AC036111.1-201ENST00000533973 1582 ntBASIC17.05■□□□□ 0.32
RLIMQ9NVW2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
RLIMQ9NVW2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.04■□□□□ 0.32
RLIMQ9NVW2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 MIR1238-201ENST00000408483 83 ntBASIC17.04■□□□□ 0.32
RLIMQ9NVW2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 AL355075.4-201ENST00000554988 638 ntBASIC17.04■□□□□ 0.32
RLIMQ9NVW2 MIR3180-5-201ENST00000583743 153 ntBASIC17.04■□□□□ 0.32
RLIMQ9NVW2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 KRT8P50-201ENST00000562022 1438 ntBASIC17.04■□□□□ 0.32
RLIMQ9NVW2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.04■□□□□ 0.32
RLIMQ9NVW2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 TSPY15P-201ENST00000457163 923 ntBASIC17.03■□□□□ 0.32
RLIMQ9NVW2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 FITM1-202ENST00000559294 800 ntBASIC17.03■□□□□ 0.32
RLIMQ9NVW2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RLIMQ9NVW2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms