Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.9■□□□□ 0.62
HPS4Q9NQG7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.9■□□□□ 0.62
HPS4Q9NQG7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HPS4Q9NQG7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
HPS4Q9NQG7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HPS4Q9NQG7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 AKR1C7P-201ENST00000305623 895 ntBASIC18.89■□□□□ 0.61
HPS4Q9NQG7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 AL163051.1-201ENST00000569214 1512 ntBASIC18.89■□□□□ 0.61
HPS4Q9NQG7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS4Q9NQG7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 SLC25A6P4-201ENST00000586535 553 ntBASIC18.88■□□□□ 0.61
HPS4Q9NQG7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 AC005332.7-201ENST00000614046 2005 ntBASIC18.88■□□□□ 0.61
HPS4Q9NQG7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS4Q9NQG7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 AC020763.4-201ENST00000623414 4170 ntBASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 AC106795.1-205ENST00000512851 1056 ntBASIC18.87■□□□□ 0.61
HPS4Q9NQG7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 AL121912.1-201ENST00000603683 238 ntBASIC18.87■□□□□ 0.61
HPS4Q9NQG7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 AC004263.2-201ENST00000617183 678 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms