Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
HMG20AQ9NP66 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 MIR4758-201ENST00000577688 71 ntBASIC16.63■□□□□ 0.25
HMG20AQ9NP66 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.63■□□□□ 0.25
HMG20AQ9NP66 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMG20AQ9NP66 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
HMG20AQ9NP66 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.61■□□□□ 0.25
HMG20AQ9NP66 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms