Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PIF1Q9H611 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
PIF1Q9H611 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PIF1Q9H611 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 AC004980.1-204ENST00000429707 299 ntBASIC17.48■□□□□ 0.39
PIF1Q9H611 TSPY20P-201ENST00000450910 630 ntBASIC17.48■□□□□ 0.39
PIF1Q9H611 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.48■□□□□ 0.39
PIF1Q9H611 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PIF1Q9H611 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.48■□□□□ 0.39
PIF1Q9H611 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.48■□□□□ 0.39
PIF1Q9H611 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.48■□□□□ 0.39
PIF1Q9H611 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PIF1Q9H611 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.48■□□□□ 0.39
PIF1Q9H611 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.48■□□□□ 0.39
PIF1Q9H611 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.48■□□□□ 0.39
PIF1Q9H611 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PIF1Q9H611 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PIF1Q9H611 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PIF1Q9H611 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 KRT18P29-201ENST00000397031 1267 ntBASIC17.47■□□□□ 0.39
PIF1Q9H611 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.47■□□□□ 0.39
PIF1Q9H611 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.47■□□□□ 0.39
PIF1Q9H611 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PIF1Q9H611 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 AL445675.2-201ENST00000620291 557 ntBASIC17.47■□□□□ 0.39
PIF1Q9H611 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PIF1Q9H611 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PIF1Q9H611 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PIF1Q9H611 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PIF1Q9H611 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PIF1Q9H611 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.46■□□□□ 0.39
PIF1Q9H611 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
PIF1Q9H611 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms