Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS11Q9H270 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 AC012313.1-201ENST00000593393 3059 ntBASIC18.41■□□□□ 0.54
VPS11Q9H270 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 AL109659.2-201ENST00000606809 1674 ntBASIC18.41■□□□□ 0.54
VPS11Q9H270 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS11Q9H270 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS11Q9H270 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VPS11Q9H270 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS11Q9H270 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS11Q9H270 B3GAT3P1-201ENST00000471720 806 ntBASIC18.41■□□□□ 0.54
VPS11Q9H270 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.41■□□□□ 0.54
VPS11Q9H270 RPPH1-201ENST00000516869 333 ntBASIC18.41■□□□□ 0.54
VPS11Q9H270 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS11Q9H270 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VPS11Q9H270 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.41■□□□□ 0.54
VPS11Q9H270 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS11Q9H270 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS11Q9H270 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS11Q9H270 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VPS11Q9H270 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VPS11Q9H270 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS11Q9H270 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS11Q9H270 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS11Q9H270 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.4■□□□□ 0.54
VPS11Q9H270 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
VPS11Q9H270 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS11Q9H270 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS11Q9H270 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.39■□□□□ 0.54
VPS11Q9H270 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
VPS11Q9H270 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS11Q9H270 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.39■□□□□ 0.54
VPS11Q9H270 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS11Q9H270 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS11Q9H270 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.54
VPS11Q9H270 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS11Q9H270 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS11Q9H270 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS11Q9H270 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VPS11Q9H270 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS11Q9H270 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.39■□□□□ 0.53
VPS11Q9H270 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS11Q9H270 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS11Q9H270 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS11Q9H270 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VPS11Q9H270 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS11Q9H270 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS11Q9H270 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms