Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 GRK6P1-201ENST00000400595 1711 ntBASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 AC005089.1-201ENST00000619486 2241 ntBASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 HLA-DQB1-201ENST00000374943 1656 ntBASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CYSTM1Q9H1C7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 AP003680.1-201ENST00000598970 3660 ntBASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 AC083906.6-201ENST00000641366 219 ntBASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CYSTM1Q9H1C7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms