Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 AC233263.1-201ENST00000578059 224 ntBASIC16.79■□□□□ 0.28
COPS4Q9BT78 AL023875.1-201ENST00000640777 796 ntBASIC16.79■□□□□ 0.28
COPS4Q9BT78 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COPS4Q9BT78 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS4Q9BT78 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 AC141586.5-201ENST00000624546 2050 ntBASIC16.78■□□□□ 0.28
COPS4Q9BT78 ESRRAP1-201ENST00000400596 1257 ntBASIC16.78■□□□□ 0.28
COPS4Q9BT78 KRASP1-201ENST00000407852 552 ntBASIC16.78■□□□□ 0.28
COPS4Q9BT78 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS4Q9BT78 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS4Q9BT78 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 PP12613-201ENST00000424958 2230 ntBASIC16.77■□□□□ 0.28
COPS4Q9BT78 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPS4Q9BT78 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS4Q9BT78 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms