Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.13■□□□□ 0.65
SMOQ99835 AC092329.2-201ENST00000598402 547 ntBASIC19.13■□□□□ 0.65
SMOQ99835 AC124864.1-201ENST00000623408 392 ntBASIC19.13■□□□□ 0.65
SMOQ99835 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMOQ99835 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMOQ99835 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 AC093677.2-201ENST00000600169 1863 ntBASIC19.12■□□□□ 0.65
SMOQ99835 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMOQ99835 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.12■□□□□ 0.65
SMOQ99835 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMOQ99835 DRAXINP1-201ENST00000437611 948 ntBASIC19.12■□□□□ 0.65
SMOQ99835 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 KRT18P56-201ENST00000507275 550 ntBASIC19.12■□□□□ 0.65
SMOQ99835 GUSBP12-201ENST00000513727 720 ntBASIC19.12■□□□□ 0.65
SMOQ99835 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.12■□□□□ 0.65
SMOQ99835 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SMOQ99835 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.12■□□□□ 0.65
SMOQ99835 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
SMOQ99835 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SMOQ99835 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMOQ99835 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 AC132938.6-201ENST00000623828 1655 ntBASIC19.11■□□□□ 0.65
SMOQ99835 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 AC135776.1-201ENST00000319817 2481 ntBASIC19.11■□□□□ 0.65
SMOQ99835 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
SMOQ99835 TSPY12P-201ENST00000421279 868 ntBASIC19.11■□□□□ 0.65
SMOQ99835 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.11■□□□□ 0.65
SMOQ99835 AL845331.1-201ENST00000424978 1190 ntBASIC19.11■□□□□ 0.65
SMOQ99835 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMOQ99835 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.11■□□□□ 0.65
SMOQ99835 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
SMOQ99835 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMOQ99835 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.11■□□□□ 0.65
SMOQ99835 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMOQ99835 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMOQ99835 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
SMOQ99835 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
SMOQ99835 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.1■□□□□ 0.65
SMOQ99835 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.1■□□□□ 0.65
SMOQ99835 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.1■□□□□ 0.65
SMOQ99835 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.1■□□□□ 0.65
SMOQ99835 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.1■□□□□ 0.65
SMOQ99835 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.1■□□□□ 0.65
SMOQ99835 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SMOQ99835 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SMOQ99835 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMOQ99835 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.09■□□□□ 0.65
SMOQ99835 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms