Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 LINC01126-201ENST00000623515 1646 ntBASIC15.79■□□□□ 0.12
GFI1Q99684 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFI1Q99684 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GFI1Q99684 AL163051.1-201ENST00000569214 1512 ntBASIC15.78■□□□□ 0.12
GFI1Q99684 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.78■□□□□ 0.12
GFI1Q99684 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.78■□□□□ 0.12
GFI1Q99684 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
GFI1Q99684 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GFI1Q99684 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
GFI1Q99684 FAM207BP-201ENST00000447172 505 ntBASIC15.78■□□□□ 0.12
GFI1Q99684 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.78■□□□□ 0.12
GFI1Q99684 AC026366.1-201ENST00000488803 879 ntBASIC15.78■□□□□ 0.12
GFI1Q99684 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.78■□□□□ 0.12
GFI1Q99684 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.78■□□□□ 0.12
GFI1Q99684 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.78■□□□□ 0.12
GFI1Q99684 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.78■□□□□ 0.12
GFI1Q99684 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.78■□□□□ 0.12
GFI1Q99684 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.78■□□□□ 0.12
GFI1Q99684 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GFI1Q99684 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.77■□□□□ 0.12
GFI1Q99684 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
GFI1Q99684 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
GFI1Q99684 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
GFI1Q99684 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
GFI1Q99684 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GFI1Q99684 MCCD1P1-208ENST00000445732 328 ntBASIC15.77■□□□□ 0.12
GFI1Q99684 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
GFI1Q99684 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.77■□□□□ 0.12
GFI1Q99684 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
GFI1Q99684 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.77■□□□□ 0.12
GFI1Q99684 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.77■□□□□ 0.12
GFI1Q99684 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.77■□□□□ 0.12
GFI1Q99684 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.77■□□□□ 0.12
GFI1Q99684 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GFI1Q99684 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 AC009102.3-201ENST00000623118 1491 ntBASIC15.77■□□□□ 0.11
GFI1Q99684 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
GFI1Q99684 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GFI1Q99684 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
GFI1Q99684 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.76■□□□□ 0.11
GFI1Q99684 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.76■□□□□ 0.11
GFI1Q99684 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GFI1Q99684 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.76■□□□□ 0.11
GFI1Q99684 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GFI1Q99684 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.76■□□□□ 0.11
GFI1Q99684 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
GFI1Q99684 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFI1Q99684 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.76■□□□□ 0.11
GFI1Q99684 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms