Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
IFT140Q96RY7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
IFT140Q96RY7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
IFT140Q96RY7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
IFT140Q96RY7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
IFT140Q96RY7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 IGHV3-65-201ENST00000523210 341 ntBASIC30.12■■■□□ 2.41
IFT140Q96RY7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC30.12■■■□□ 2.41
IFT140Q96RY7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 CD99-202ENST00000381180 530 ntTSL 2 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 AC092474.2-201ENST00000424288 719 ntBASIC30.11■■■□□ 2.41
IFT140Q96RY7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC30.11■■■□□ 2.41
IFT140Q96RY7 AC008667.4-201ENST00000607370 168 ntBASIC30.11■■■□□ 2.41
IFT140Q96RY7 AL513210.1-201ENST00000629608 234 ntBASIC30.11■■■□□ 2.41
IFT140Q96RY7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
IFT140Q96RY7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
IFT140Q96RY7 AC006504.4-201ENST00000592118 1568 ntBASIC30.1■■■□□ 2.41
IFT140Q96RY7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
IFT140Q96RY7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC30.1■■■□□ 2.41
IFT140Q96RY7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
IFT140Q96RY7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
IFT140Q96RY7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC30.1■■■□□ 2.41
IFT140Q96RY7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC30.1■■■□□ 2.41
IFT140Q96RY7 AC010507.1-201ENST00000633895 436 ntBASIC30.1■■■□□ 2.41
IFT140Q96RY7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC30.1■■■□□ 2.41
IFT140Q96RY7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
IFT140Q96RY7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
IFT140Q96RY7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC30.09■■■□□ 2.41
IFT140Q96RY7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
IFT140Q96RY7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
IFT140Q96RY7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
IFT140Q96RY7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
IFT140Q96RY7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
IFT140Q96RY7 AC004817.3-201ENST00000602957 2129 ntBASIC30.08■■■□□ 2.41
IFT140Q96RY7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
IFT140Q96RY7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AL035252.4-201ENST00000624174 288 ntBASIC30.07■■■□□ 2.4
IFT140Q96RY7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
IFT140Q96RY7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
IFT140Q96RY7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC30.06■■■□□ 2.4
IFT140Q96RY7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
IFT140Q96RY7 ACTG1P14-201ENST00000446382 1122 ntBASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms