Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPRD1AQ96P16 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 AC005332.3-201ENST00000589904 676 ntBASIC18.81■□□□□ 0.6
RPRD1AQ96P16 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 KRT89P-201ENST00000620027 1478 ntBASIC18.81■□□□□ 0.6
RPRD1AQ96P16 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 LINC01126-201ENST00000623515 1646 ntBASIC18.81■□□□□ 0.6
RPRD1AQ96P16 Z83836.1-201ENST00000624605 1642 ntBASIC18.81■□□□□ 0.6
RPRD1AQ96P16 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPRD1AQ96P16 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPRD1AQ96P16 ESPNP-201ENST00000270691 2015 ntBASIC18.79■□□□□ 0.6
RPRD1AQ96P16 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 IGHGP-201ENST00000390555 1178 ntBASIC18.79■□□□□ 0.6
RPRD1AQ96P16 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 GPR32P1-201ENST00000601788 811 ntBASIC18.79■□□□□ 0.6
RPRD1AQ96P16 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPRD1AQ96P16 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.78■□□□□ 0.6
RPRD1AQ96P16 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
RPRD1AQ96P16 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPRD1AQ96P16 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPRD1AQ96P16 HTR7P1-202ENST00000624664 4411 ntBASIC18.78■□□□□ 0.6
RPRD1AQ96P16 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms