Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 CEND1P1-201ENST00000451006 455 ntBASIC19.82■□□□□ 0.76
ALPK3Q96L96 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 FEM1AP3-201ENST00000403722 1741 ntBASIC19.82■□□□□ 0.76
ALPK3Q96L96 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
ALPK3Q96L96 SIGLEC16-201ENST00000599858 1437 ntBASIC19.82■□□□□ 0.76
ALPK3Q96L96 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALPK3Q96L96 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 ADH5P3-201ENST00000433842 1137 ntBASIC19.81■□□□□ 0.76
ALPK3Q96L96 AC109322.1-201ENST00000524499 1264 ntBASIC19.81■□□□□ 0.76
ALPK3Q96L96 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 Z92544.3-201ENST00000624747 417 ntBASIC19.81■□□□□ 0.76
ALPK3Q96L96 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALPK3Q96L96 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ALPK3Q96L96 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 PDPK2P-202ENST00000562415 1191 ntBASIC19.8■□□□□ 0.76
ALPK3Q96L96 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 FP475955.4-201ENST00000623131 1990 ntBASIC19.8■□□□□ 0.76
ALPK3Q96L96 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ALPK3Q96L96 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALPK3Q96L96 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ALPK3Q96L96 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.79■□□□□ 0.76
ALPK3Q96L96 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms