Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 AL121829.2-201ENST00000620908 328 ntBASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM2Q96JY6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AP000593.1-201ENST00000393668 712 ntBASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 NTF6G-201ENST00000591094 616 ntBASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AC087623.3-201ENST00000607047 1098 ntBASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 LINC00304-203ENST00000565008 1864 ntBASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM2Q96JY6 AL603756.1-201ENST00000606511 2163 ntBASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 AC026691.1-201ENST00000602502 2017 ntBASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM2Q96JY6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 AL356309.3-201ENST00000624132 1934 ntBASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 Z85996.1-201ENST00000494644 937 ntBASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM2Q96JY6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 PCDHB17P-201ENST00000539533 2393 ntBASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM2Q96JY6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms