Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 RN7SL850P-201ENST00000579959 291 ntBASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VCPIP1Q96JH7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 PVRIG2P-201ENST00000435460 978 ntBASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VCPIP1Q96JH7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 KRT18P35-201ENST00000510488 1269 ntBASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.24■□□□□ 0.67
VCPIP1Q96JH7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 ARMC10P1-201ENST00000313754 855 ntBASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 SLC25A3P1-201ENST00000443844 931 ntBASIC19.23■□□□□ 0.67
VCPIP1Q96JH7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms