Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC25A1P4-201ENST00000567977 778 ntBASIC17.44■□□□□ 0.38
ITCHQ96J02 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.44■□□□□ 0.38
ITCHQ96J02 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.44■□□□□ 0.38
ITCHQ96J02 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ITCHQ96J02 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ITCHQ96J02 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.43■□□□□ 0.38
ITCHQ96J02 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ITCHQ96J02 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.43■□□□□ 0.38
ITCHQ96J02 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 CD99P1-205ENST00000527459 561 ntBASIC17.43■□□□□ 0.38
ITCHQ96J02 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 CD177P1-201ENST00000606252 935 ntBASIC17.43■□□□□ 0.38
ITCHQ96J02 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.43■□□□□ 0.38
ITCHQ96J02 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
ITCHQ96J02 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
ITCHQ96J02 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ITCHQ96J02 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ITCHQ96J02 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ITCHQ96J02 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.42■□□□□ 0.38
ITCHQ96J02 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.42■□□□□ 0.38
ITCHQ96J02 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.42■□□□□ 0.38
ITCHQ96J02 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ITCHQ96J02 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ITCHQ96J02 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
ITCHQ96J02 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
ITCHQ96J02 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.41■□□□□ 0.38
ITCHQ96J02 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.41■□□□□ 0.38
ITCHQ96J02 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
ITCHQ96J02 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ITCHQ96J02 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ITCHQ96J02 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ITCHQ96J02 CA15P1-201ENST00000481698 905 ntBASIC17.41■□□□□ 0.38
ITCHQ96J02 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.41■□□□□ 0.38
ITCHQ96J02 MIR3180-5-201ENST00000583743 153 ntBASIC17.41■□□□□ 0.38
ITCHQ96J02 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.41■□□□□ 0.38
ITCHQ96J02 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.41■□□□□ 0.38
ITCHQ96J02 AL359736.2-201ENST00000621992 437 ntBASIC17.41■□□□□ 0.38
ITCHQ96J02 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ITCHQ96J02 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
ITCHQ96J02 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.41■□□□□ 0.38
ITCHQ96J02 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms