Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 MINOS1P3-201ENST00000457048 203 ntBASIC19.78■□□□□ 0.76
PGBD4Q96DM1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 EMBP1-201ENST00000458200 901 ntBASIC19.78■□□□□ 0.76
PGBD4Q96DM1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 SDHAP2-201ENST00000455183 2001 ntBASIC19.78■□□□□ 0.76
PGBD4Q96DM1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PGBD4Q96DM1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PGBD4Q96DM1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PGBD4Q96DM1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.77■□□□□ 0.75
PGBD4Q96DM1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PGBD4Q96DM1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 TSPY12P-201ENST00000421279 868 ntBASIC19.76■□□□□ 0.75
PGBD4Q96DM1 KRT16P4-201ENST00000453883 522 ntBASIC19.76■□□□□ 0.75
PGBD4Q96DM1 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PGBD4Q96DM1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 POM121L3P-201ENST00000419331 1163 ntBASIC19.75■□□□□ 0.75
PGBD4Q96DM1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 FDX1P1-201ENST00000449115 551 ntBASIC19.75■□□□□ 0.75
PGBD4Q96DM1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 AL353801.3-201ENST00000609898 542 ntBASIC19.75■□□□□ 0.75
PGBD4Q96DM1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 KRT8P10-201ENST00000450021 1447 ntBASIC19.75■□□□□ 0.75
PGBD4Q96DM1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PGBD4Q96DM1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PGBD4Q96DM1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PGBD4Q96DM1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms