Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 KRT18P23-201ENST00000435622 1283 ntBASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 SEC1P-202ENST00000473944 940 ntBASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 HYMAI.1-201ENST00000620949 238 ntBASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 AC005332.1-201ENST00000577698 1310 ntBASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SH3KBP1Q96B97 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 AC116407.4-201ENST00000623319 1061 ntBASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH3KBP1Q96B97 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 AC104581.1-202ENST00000635932 2618 ntBASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 AC034236.2-201ENST00000606662 1610 ntBASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 MIR3917-201ENST00000580971 93 ntBASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 AC083849.1-201ENST00000615227 514 ntBASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.1■□□□□ 0.49
SH3KBP1Q96B97 AL031598.1-201ENST00000561511 1773 ntBASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms