Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 FSCN1P1-201ENST00000568912 1481 ntBASIC21.67■■□□□ 1.06
SNX21Q969T3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.67■■□□□ 1.06
SNX21Q969T3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.67■■□□□ 1.06
SNX21Q969T3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.67■■□□□ 1.06
SNX21Q969T3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.67■■□□□ 1.06
SNX21Q969T3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
SNX21Q969T3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 AC084018.2-201ENST00000613093 2607 ntBASIC21.67■■□□□ 1.06
SNX21Q969T3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.67■■□□□ 1.06
SNX21Q969T3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX21Q969T3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.67■■□□□ 1.06
SNX21Q969T3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SNX21Q969T3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNX21Q969T3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 DUTP2-201ENST00000519164 463 ntBASIC21.66■■□□□ 1.06
SNX21Q969T3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.66■■□□□ 1.06
SNX21Q969T3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.66■■□□□ 1.06
SNX21Q969T3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.66■■□□□ 1.06
SNX21Q969T3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX21Q969T3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.66■■□□□ 1.06
SNX21Q969T3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
SNX21Q969T3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.65■■□□□ 1.06
SNX21Q969T3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.65■■□□□ 1.06
SNX21Q969T3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SNX21Q969T3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX21Q969T3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX21Q969T3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX21Q969T3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.64■■□□□ 1.06
SNX21Q969T3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.64■■□□□ 1.06
SNX21Q969T3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX21Q969T3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX21Q969T3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX21Q969T3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
SNX21Q969T3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 AC133963.1-201ENST00000504166 1679 ntBASIC21.64■■□□□ 1.05
SNX21Q969T3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 MIR935-201ENST00000401179 91 ntBASIC21.64■■□□□ 1.05
SNX21Q969T3 AL355802.2-201ENST00000402069 882 ntBASIC21.64■■□□□ 1.05
SNX21Q969T3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.64■■□□□ 1.05
SNX21Q969T3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.64■■□□□ 1.05
SNX21Q969T3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.64■■□□□ 1.05
SNX21Q969T3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 MIR4674-201ENST00000582457 87 ntBASIC21.64■■□□□ 1.05
SNX21Q969T3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.64■■□□□ 1.05
SNX21Q969T3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.64■■□□□ 1.05
SNX21Q969T3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SNX21Q969T3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNX21Q969T3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.63■■□□□ 1.05
SNX21Q969T3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.63■■□□□ 1.05
SNX21Q969T3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms