Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.64■■□□□ 1.06
SH3RF3Q8TEJ3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 MTCL1P1-201ENST00000446207 792 ntBASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 AC096582.2-201ENST00000510860 516 ntBASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF3Q8TEJ3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AL160237.2-201ENST00000556165 472 ntBASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF3Q8TEJ3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 GMCL1P1-201ENST00000463439 1581 ntBASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 ESPNP-201ENST00000270691 2015 ntBASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 POM121L3P-201ENST00000419331 1163 ntBASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF3Q8TEJ3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 MIR5100-201ENST00000579544 119 ntBASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 REXO1L6P-202ENST00000619970 1078 ntBASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF3Q8TEJ3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms