Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 RAP2CP1-201ENST00000605103 478 ntBASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00308Q8TCZ7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 NFIC-211ENST00000641145 8399 ntBASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 LSM12P1-201ENST00000411836 588 ntBASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 AC011270.2-201ENST00000624293 2550 ntBASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00308Q8TCZ7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 UBALD1-205ENST00000590891 2641 ntBASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00308Q8TCZ7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms