Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AC093512.1-201ENST00000617969 520 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 PRSS29P-201ENST00000440800 595 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 PMPCAP1-201ENST00000508114 1576 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AL022326.1-202ENST00000641533 845 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AC009102.3-201ENST00000623118 1491 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 Z92544.3-201ENST00000624747 417 ntBASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 AC023141.5-201ENST00000458585 616 ntBASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 AC087641.1-201ENST00000557561 1021 ntBASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ALMS1Q8TCU4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 PAWRP1-201ENST00000451083 565 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 IGHV3-65-201ENST00000523210 341 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC190387.1-201ENST00000551683 408 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 KRT19P2-202ENST00000557173 1012 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 CEND1P1-201ENST00000451006 455 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms