Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AC092329.2-201ENST00000598402 547 ntBASIC19.62■□□□□ 0.73
BEST2Q8NFU1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.62■□□□□ 0.73
BEST2Q8NFU1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST2Q8NFU1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 AL138781.2-201ENST00000617896 1843 ntBASIC19.6■□□□□ 0.73
BEST2Q8NFU1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST2Q8NFU1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.59■□□□□ 0.73
BEST2Q8NFU1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms