Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA6Q8N139 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA6Q8N139 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA6Q8N139 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
ABCA6Q8N139 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 SIGLEC16-201ENST00000599858 1437 ntBASIC26.94■■□□□ 1.9
ABCA6Q8N139 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 PMPCAP1-201ENST00000508114 1576 ntBASIC26.94■■□□□ 1.9
ABCA6Q8N139 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA6Q8N139 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC26.94■■□□□ 1.9
ABCA6Q8N139 MIR4469-201ENST00000583919 79 ntBASIC26.94■■□□□ 1.9
ABCA6Q8N139 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA6Q8N139 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA6Q8N139 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA6Q8N139 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA6Q8N139 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA6Q8N139 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 AC108073.2-201ENST00000464002 357 ntBASIC26.93■■□□□ 1.9
ABCA6Q8N139 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC26.93■■□□□ 1.9
ABCA6Q8N139 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.92■■□□□ 1.9
ABCA6Q8N139 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA6Q8N139 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA6Q8N139 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA6Q8N139 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 AL078644.1-201ENST00000609881 752 ntBASIC26.92■■□□□ 1.9
ABCA6Q8N139 AC092865.6-201ENST00000642101 219 ntBASIC26.92■■□□□ 1.9
ABCA6Q8N139 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA6Q8N139 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA6Q8N139 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.92■■□□□ 1.9
ABCA6Q8N139 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 AC018845.2-201ENST00000568326 409 ntBASIC26.91■■□□□ 1.9
ABCA6Q8N139 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA6Q8N139 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA6Q8N139 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 SPCS2P1-201ENST00000561636 679 ntBASIC26.9■■□□□ 1.9
ABCA6Q8N139 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 AL022326.1-202ENST00000641533 845 ntBASIC26.9■■□□□ 1.9
ABCA6Q8N139 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 SRP19-202ENST00000445150 833 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA6Q8N139 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA6Q8N139 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms