Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 EGLN1P1-201ENST00000531623 762 ntBASIC16.92■□□□□ 0.3
VRK2Q86Y07 AC010653.2-201ENST00000623505 997 ntBASIC16.92■□□□□ 0.3
VRK2Q86Y07 AC112497.1-201ENST00000624824 639 ntBASIC16.92■□□□□ 0.3
VRK2Q86Y07 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK2Q86Y07 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK2Q86Y07 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.91■□□□□ 0.3
VRK2Q86Y07 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AC010947.1-201ENST00000623454 693 ntBASIC16.91■□□□□ 0.3
VRK2Q86Y07 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK2Q86Y07 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VRK2Q86Y07 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 LINC01126-201ENST00000623515 1646 ntBASIC16.9■□□□□ 0.3
VRK2Q86Y07 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 AC104390.1-201ENST00000555663 520 ntBASIC16.9■□□□□ 0.3
VRK2Q86Y07 NAPSB-206ENST00000562112 1266 ntBASIC16.9■□□□□ 0.3
VRK2Q86Y07 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK2Q86Y07 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VRK2Q86Y07 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms