Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 FAM197Y8-203ENST00000450145 560 ntBASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 AF228730.7-201ENST00000641842 219 ntBASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 AL031284.1-201ENST00000419297 478 ntBASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 POM121L3P-201ENST00000419331 1163 ntBASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 MINOS1P3-201ENST00000457048 203 ntBASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAI1Q7Z5J4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 AC004408.2-201ENST00000623613 2777 ntBASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 AC079776.4-201ENST00000511039 504 ntBASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 AC126763.1-201ENST00000552015 2118 ntBASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 AC006538.3-201ENST00000612495 578 ntBASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 AC083906.6-201ENST00000641366 219 ntBASIC15.53■□□□□ 0.08
RAI1Q7Z5J4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 WIZP1-201ENST00000531444 2299 ntBASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAI1Q7Z5J4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 GPALPP1-207ENST00000611650 899 ntBASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.52■□□□□ 0.07
RAI1Q7Z5J4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAI1Q7Z5J4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms