Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 BX005266.1-201ENST00000473402 457 ntBASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 AC112698.1-201ENST00000510299 916 ntBASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 AC064836.3-201ENST00000607928 673 ntBASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.53
KRT28Q7Z3Y7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.64■■□□□ 1.53
KRT28Q7Z3Y7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
KRT28Q7Z3Y7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
KRT28Q7Z3Y7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 PCDHAC2-203ENST00000615316 3011 ntBASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 KRT18P2-201ENST00000447938 1258 ntBASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT28Q7Z3Y7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 KRT18P27-201ENST00000427733 1299 ntBASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
KRT28Q7Z3Y7 AL032819.2-201ENST00000624543 2162 ntBASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 METTL21AP1-201ENST00000438852 635 ntBASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT28Q7Z3Y7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 AC073621.1-201ENST00000392730 636 ntBASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT28Q7Z3Y7 AC079776.2-201ENST00000641154 1609 ntBASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms