Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AL049812.1-201ENST00000432563 2267 ntBASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC092865.5-201ENST00000545435 363 ntBASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 MIR5100-201ENST00000579544 119 ntBASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AC114341.1-201ENST00000618070 349 ntBASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC149Q6ZUS6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 MIR1233-2-201ENST00000408138 82 ntBASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 MIR1233-1-201ENST00000408722 82 ntBASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 RNPS1P1-201ENST00000507437 918 ntBASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 SDHAP2-201ENST00000455183 2001 ntBASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC149Q6ZUS6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 AC005332.7-201ENST00000614046 2005 ntBASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 AC008608.2-201ENST00000606089 416 ntBASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC149Q6ZUS6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC149Q6ZUS6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC149Q6ZUS6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CCDC149Q6ZUS6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 AC148477.8-201ENST00000624298 468 ntBASIC19.14■□□□□ 0.65
CCDC149Q6ZUS6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms