Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SLC25A3P1-201ENST00000443844 931 ntBASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 AL512604.3-201ENST00000569583 964 ntBASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 AC093677.2-201ENST00000600169 1863 ntBASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ESPNP-201ENST00000270691 2015 ntBASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AC010203.1-204ENST00000548782 407 ntBASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AC141257.4-201ENST00000634557 245 ntBASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AC136944.6-201ENST00000634818 245 ntBASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NHLRC1Q6VVB1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AC135776.1-201ENST00000319817 2481 ntBASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 MIR149-201ENST00000384879 89 ntBASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AC211429.1-201ENST00000415277 523 ntBASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AC133561.5-201ENST00000635547 218 ntBASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
NHLRC1Q6VVB1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms