Protein–RNA interactions for Protein: Q6UUV7

CRTC3, CREB-regulated transcription coactivator 3, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3Q6UUV7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 MYLKP1-201ENST00000509077 1580 ntBASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 AC112777.1-201ENST00000540175 1423 ntBASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 HBZP1-201ENST00000354915 429 ntBASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 ZNF444P1-201ENST00000559497 298 ntBASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 AL136038.4-201ENST00000603606 1261 ntBASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.17■□□□□ 0.5
CRTC3Q6UUV7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 AL358472.4-201ENST00000633140 710 ntBASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CRTC3Q6UUV7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AL163051.1-201ENST00000569214 1512 ntBASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AL391807.1-203ENST00000604392 2365 ntBASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 AL121956.5-201ENST00000625261 221 ntBASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 FZD10-202ENST00000539839 3282 ntBASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CRTC3Q6UUV7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CRTC3Q6UUV7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.14■□□□□ 0.5
CRTC3Q6UUV7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CRTC3Q6UUV7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CRTC3Q6UUV7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 SPDYE13P-201ENST00000445314 798 ntBASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 AC009065.1-201ENST00000564055 1225 ntBASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 MIR3180-4-201ENST00000582223 153 ntBASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CRTC3Q6UUV7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms