Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 AL031963.3-201ENST00000606441 850 ntBASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 CR392000.1-201ENST00000624770 1228 ntBASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 AL390955.1-201ENST00000428694 934 ntBASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXR1Q6PIV2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 LINC01568-207ENST00000641790 1380 ntBASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 HLA-G-202ENST00000376815 851 ntBASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 HLA-G-203ENST00000376818 1127 ntBASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 AC005521.1-201ENST00000393351 872 ntBASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 KRT8P17-201ENST00000453110 1448 ntBASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FOXR1Q6PIV2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 AC145285.6-201ENST00000604632 637 ntBASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 AL590326.2-201ENST00000625139 305 ntBASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 AC092865.7-201ENST00000641832 219 ntBASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms