Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 AC092338.2-201ENST00000568827 1415 ntBASIC16.67■□□□□ 0.26
NIPAL3Q6P499 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NIPAL3Q6P499 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
NIPAL3Q6P499 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 INGX-201ENST00000359239 846 ntBASIC16.66■□□□□ 0.26
NIPAL3Q6P499 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 AC133561.5-201ENST00000635547 218 ntBASIC16.66■□□□□ 0.26
NIPAL3Q6P499 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
NIPAL3Q6P499 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 AC134043.2-201ENST00000624206 2238 ntBASIC16.65■□□□□ 0.26
NIPAL3Q6P499 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SLC25A6P5-201ENST00000435663 894 ntBASIC16.65■□□□□ 0.26
NIPAL3Q6P499 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ECEL1P2-202ENST00000465689 757 ntBASIC16.65■□□□□ 0.26
NIPAL3Q6P499 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NIPAL3Q6P499 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
NIPAL3Q6P499 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NIPAL3Q6P499 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.64■□□□□ 0.26
NIPAL3Q6P499 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
NIPAL3Q6P499 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.64■□□□□ 0.26
NIPAL3Q6P499 MYLKP1-201ENST00000509077 1580 ntBASIC16.64■□□□□ 0.25
NIPAL3Q6P499 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 MIR4674-201ENST00000582457 87 ntBASIC16.64■□□□□ 0.25
NIPAL3Q6P499 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 AC010653.2-201ENST00000623505 997 ntBASIC16.64■□□□□ 0.25
NIPAL3Q6P499 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms