Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQA1Q5Y7H0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 MIR1224-201ENST00000408193 85 ntBASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC112907.2-201ENST00000448639 330 ntBASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQA1Q5Y7H0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 SPDYE15P-201ENST00000424157 909 ntBASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC073592.3-201ENST00000625118 1834 ntBASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA1Q5Y7H0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 PVRIG2P-201ENST00000435460 978 ntBASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC087388.1-201ENST00000571370 1112 ntBASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 NTF6B-201ENST00000591913 560 ntBASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA1Q5Y7H0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms