Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 RPL21P136-201ENST00000605378 396 ntBASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 CU459211.1-201ENST00000635667 749 ntBASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHIC1Q5VXU3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 AC110760.3-202ENST00000515177 371 ntBASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 AP003400.5-201ENST00000624827 617 ntBASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 AC068137.4-201ENST00000638485 296 ntBASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CHIC1Q5VXU3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC31.55■■■□□ 2.64
CHIC1Q5VXU3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 OR4A48P-201ENST00000531359 391 ntBASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 AC008993.2-201ENST00000631744 806 ntBASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 AC073592.3-201ENST00000625118 1834 ntBASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CHIC1Q5VXU3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC034236.2-201ENST00000606662 1610 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 HOXB1-202ENST00000577092 1414 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 PPP2R2DP1-201ENST00000420526 637 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 ECEL1P3-201ENST00000427961 737 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC009947.2-201ENST00000444014 672 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AP003117.1-201ENST00000602771 554 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC067773.1-201ENST00000603284 1094 ntBASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC31.53■■■□□ 2.64
CHIC1Q5VXU3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms