Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC108073.2-201ENST00000464002 357 ntBASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 GPR89P-201ENST00000407924 1495 ntBASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 KRT18P65-201ENST00000439811 1286 ntBASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC29.72■■■□□ 2.35
SNAPC4Q5SXM2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 AL139400.1-201ENST00000366220 510 ntBASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 HLA-J-202ENST00000469281 1241 ntBASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SNAPC4Q5SXM2 PMPCAP1-201ENST00000508114 1576 ntBASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
SNAPC4Q5SXM2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 LINC00602-201ENST00000629776 2065 ntBASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.7■■■□□ 2.34
SNAPC4Q5SXM2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 AC007967.3-201ENST00000434308 558 ntBASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 HCG4B-203ENST00000450128 991 ntBASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 AC099343.3-201ENST00000605834 2503 ntBASIC29.69■■■□□ 2.34
SNAPC4Q5SXM2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 SIGLEC16-201ENST00000599858 1437 ntBASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 AL031432.2-201ENST00000566714 459 ntBASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 AL928711.1-201ENST00000570165 459 ntBASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC29.68■■■□□ 2.34
SNAPC4Q5SXM2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms