Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 AC092597.1-201ENST00000487352 616 ntBASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 KRT18P21-201ENST00000515767 1272 ntBASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 AL136038.4-201ENST00000603606 1261 ntBASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 AC093010.1-201ENST00000473625 1624 ntBASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN20Q4JDL3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 HOMER2P1-201ENST00000455653 964 ntBASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 DUX4L26-201ENST00000489078 1255 ntBASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 AC063952.2-201ENST00000498792 1227 ntBASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTPN20Q4JDL3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 HLA-F-220ENST00000434407 884 ntBASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN20Q4JDL3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 HYMAI.1-201ENST00000620949 238 ntBASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms