Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USH1GQ495M9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.95■□□□□ 0.94
USH1GQ495M9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.95■□□□□ 0.94
USH1GQ495M9 AC018445.3-201ENST00000624177 1945 ntBASIC20.95■□□□□ 0.94
USH1GQ495M9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USH1GQ495M9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USH1GQ495M9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.95■□□□□ 0.94
USH1GQ495M9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
USH1GQ495M9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USH1GQ495M9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USH1GQ495M9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.95■□□□□ 0.94
USH1GQ495M9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USH1GQ495M9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.94■□□□□ 0.94
USH1GQ495M9 AC091607.1-201ENST00000490318 1060 ntBASIC20.94■□□□□ 0.94
USH1GQ495M9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 AC012615.1-201ENST00000565797 1299 ntBASIC20.94■□□□□ 0.94
USH1GQ495M9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.94■□□□□ 0.94
USH1GQ495M9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.94■□□□□ 0.94
USH1GQ495M9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.94■□□□□ 0.94
USH1GQ495M9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USH1GQ495M9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
USH1GQ495M9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USH1GQ495M9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USH1GQ495M9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USH1GQ495M9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.93■□□□□ 0.94
USH1GQ495M9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.93■□□□□ 0.94
USH1GQ495M9 AC104819.1-201ENST00000504587 486 ntBASIC20.93■□□□□ 0.94
USH1GQ495M9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.93■□□□□ 0.94
USH1GQ495M9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.93■□□□□ 0.94
USH1GQ495M9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.93■□□□□ 0.94
USH1GQ495M9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.93■□□□□ 0.94
USH1GQ495M9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USH1GQ495M9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.93■□□□□ 0.94
USH1GQ495M9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USH1GQ495M9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 LINC00602-201ENST00000629776 2065 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 AC113404.2-201ENST00000507884 177 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 FOSL1P1-201ENST00000511041 816 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 AP005901.3-202ENST00000581653 237 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
USH1GQ495M9 AC008687.5-201ENST00000593746 558 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 AC138894.3-201ENST00000603787 634 ntBASIC20.92■□□□□ 0.94
USH1GQ495M9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
USH1GQ495M9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
USH1GQ495M9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
USH1GQ495M9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.92■□□□□ 0.94
USH1GQ495M9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USH1GQ495M9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
USH1GQ495M9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
USH1GQ495M9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USH1GQ495M9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USH1GQ495M9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USH1GQ495M9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USH1GQ495M9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USH1GQ495M9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms