Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCGF3Q3KNV8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 AC139713.2-201ENST00000641328 2723 ntBASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 AC008764.6-201ENST00000595909 2069 ntBASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 AC073592.3-201ENST00000625118 1834 ntBASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCGF3Q3KNV8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 KRT8P11-201ENST00000409686 1436 ntBASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 AC010653.2-201ENST00000623505 997 ntBASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCGF3Q3KNV8 AL162741.1-201ENST00000565563 1558 ntBASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 AC126763.1-201ENST00000552015 2118 ntBASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCGF3Q3KNV8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 FAM210CP-201ENST00000445714 574 ntBASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 AL512604.3-201ENST00000569583 964 ntBASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF3Q3KNV8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms