Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC31.99■■■□□ 2.71
HMGXB3Q12766 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HMGXB3Q12766 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HMGXB3Q12766 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC31.99■■■□□ 2.71
HMGXB3Q12766 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
HMGXB3Q12766 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HMGXB3Q12766 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.98■■■□□ 2.71
HMGXB3Q12766 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
HMGXB3Q12766 HLA-J-203ENST00000494367 1087 ntBASIC31.98■■■□□ 2.71
HMGXB3Q12766 AC004706.3-202ENST00000621574 984 ntBASIC31.98■■■□□ 2.71
HMGXB3Q12766 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 ARTN-206ENST00000472435 402 ntTSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 AL031432.2-201ENST00000566714 459 ntBASIC31.97■■■□□ 2.71
HMGXB3Q12766 AL928711.1-201ENST00000570165 459 ntBASIC31.97■■■□□ 2.71
HMGXB3Q12766 MIR4751-201ENST00000578027 74 ntBASIC31.97■■■□□ 2.71
HMGXB3Q12766 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC31.97■■■□□ 2.71
HMGXB3Q12766 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
HMGXB3Q12766 CRYGEP-201ENST00000412192 528 ntBASIC31.96■■■□□ 2.71
HMGXB3Q12766 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC31.96■■■□□ 2.71
HMGXB3Q12766 RIN3-211ENST00000557762 517 ntTSL 3 BASIC31.96■■■□□ 2.71
HMGXB3Q12766 AC010507.1-201ENST00000633895 436 ntBASIC31.96■■■□□ 2.71
HMGXB3Q12766 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC31.96■■■□□ 2.71
HMGXB3Q12766 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 LINC01126-201ENST00000623515 1646 ntBASIC31.96■■■□□ 2.71
HMGXB3Q12766 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
HMGXB3Q12766 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC31.96■■■□□ 2.71
HMGXB3Q12766 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
HMGXB3Q12766 CD82-202ENST00000342935 967 ntTSL 5 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
HMGXB3Q12766 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
HMGXB3Q12766 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 COX5A-202ENST00000562233 441 ntTSL 3 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
HMGXB3Q12766 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC31.95■■■□□ 2.71
HMGXB3Q12766 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC31.95■■■□□ 2.7
HMGXB3Q12766 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
HMGXB3Q12766 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC31.95■■■□□ 2.7
HMGXB3Q12766 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC31.95■■■□□ 2.7
HMGXB3Q12766 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC31.95■■■□□ 2.7
HMGXB3Q12766 AC008667.4-201ENST00000607370 168 ntBASIC31.95■■■□□ 2.7
HMGXB3Q12766 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.7
HMGXB3Q12766 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 METTL26-205ENST00000397666 726 ntTSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 CITED2-204ENST00000618718 901 ntTSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
HMGXB3Q12766 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC31.94■■■□□ 2.7
HMGXB3Q12766 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 AC096633.1-201ENST00000422446 749 ntBASIC31.93■■■□□ 2.7
HMGXB3Q12766 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 METTL23-205ENST00000588302 925 ntTSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC31.93■■■□□ 2.7
HMGXB3Q12766 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms