Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SYCNQ0VAF6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AP003041.3-201ENST00000527151 707 ntBASIC12.11□□□□□ -0.47
SYCNQ0VAF6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC009065.1-201ENST00000564055 1225 ntBASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 AC007613.1-201ENST00000572811 2597 ntBASIC12.11□□□□□ -0.47
SYCNQ0VAF6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.11□□□□□ -0.47
SYCNQ0VAF6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 KRT8P7-201ENST00000533003 1432 ntBASIC12.11□□□□□ -0.47
SYCNQ0VAF6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYCNQ0VAF6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 AL390955.1-201ENST00000428694 934 ntBASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 AC128688.1-201ENST00000487626 519 ntBASIC12.1□□□□□ -0.47
SYCNQ0VAF6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 AL023803.3-201ENST00000615559 522 ntBASIC12.1□□□□□ -0.47
SYCNQ0VAF6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SYCNQ0VAF6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms