Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.02■□□□□ 0.64
IRX4P78413 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX4P78413 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX4P78413 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.02■□□□□ 0.64
IRX4P78413 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX4P78413 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
IRX4P78413 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.02■□□□□ 0.64
IRX4P78413 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
IRX4P78413 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX4P78413 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IRX4P78413 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IRX4P78413 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
IRX4P78413 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IRX4P78413 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.02■□□□□ 0.63
IRX4P78413 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.01■□□□□ 0.63
IRX4P78413 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.01■□□□□ 0.63
IRX4P78413 Z98044.1-201ENST00000632503 1764 ntBASIC19.01■□□□□ 0.63
IRX4P78413 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
IRX4P78413 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
IRX4P78413 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX4P78413 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 ATP5G2P1-201ENST00000433580 426 ntBASIC19.01■□□□□ 0.63
IRX4P78413 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.01■□□□□ 0.63
IRX4P78413 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX4P78413 HYMAI.1-201ENST00000620949 238 ntBASIC19.01■□□□□ 0.63
IRX4P78413 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
IRX4P78413 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
IRX4P78413 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
IRX4P78413 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX4P78413 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
IRX4P78413 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX4P78413 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
IRX4P78413 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19■□□□□ 0.63
IRX4P78413 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19■□□□□ 0.63
IRX4P78413 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
IRX4P78413 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19■□□□□ 0.63
IRX4P78413 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 AC135050.7-201ENST00000624508 2218 ntBASIC19■□□□□ 0.63
IRX4P78413 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19■□□□□ 0.63
IRX4P78413 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19■□□□□ 0.63
IRX4P78413 CKBP1-201ENST00000565489 1086 ntBASIC19■□□□□ 0.63
IRX4P78413 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19■□□□□ 0.63
IRX4P78413 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IRX4P78413 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IRX4P78413 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX4P78413 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
IRX4P78413 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
IRX4P78413 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IRX4P78413 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 AP000523.1-201ENST00000398242 1049 ntBASIC18.99■□□□□ 0.63
IRX4P78413 AC246785.2-201ENST00000432512 513 ntBASIC18.99■□□□□ 0.63
IRX4P78413 TSPY21P-201ENST00000433481 731 ntBASIC18.99■□□□□ 0.63
IRX4P78413 TSPY23P-201ENST00000440136 739 ntBASIC18.99■□□□□ 0.63
IRX4P78413 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.99■□□□□ 0.63
IRX4P78413 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms