Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.51■□□□□ 0.23
RPS4XP62701 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPS4XP62701 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPS4XP62701 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPS4XP62701 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RPS4XP62701 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 INGX-201ENST00000359239 846 ntBASIC16.51■□□□□ 0.23
RPS4XP62701 AC022616.7-201ENST00000525383 220 ntBASIC16.51■□□□□ 0.23
RPS4XP62701 MIR3180-4-201ENST00000582223 153 ntBASIC16.51■□□□□ 0.23
RPS4XP62701 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
RPS4XP62701 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.51■□□□□ 0.23
RPS4XP62701 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPS4XP62701 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPS4XP62701 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RPS4XP62701 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPS4XP62701 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPS4XP62701 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RPS4XP62701 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4XP62701 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4XP62701 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4XP62701 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.5■□□□□ 0.23
RPS4XP62701 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.5■□□□□ 0.23
RPS4XP62701 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.5■□□□□ 0.23
RPS4XP62701 AC104390.1-201ENST00000555663 520 ntBASIC16.5■□□□□ 0.23
RPS4XP62701 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RPS4XP62701 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.5■□□□□ 0.23
RPS4XP62701 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4XP62701 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.5■□□□□ 0.23
RPS4XP62701 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4XP62701 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4XP62701 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4XP62701 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 AC099343.3-201ENST00000605834 2503 ntBASIC16.49■□□□□ 0.23
RPS4XP62701 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4XP62701 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4XP62701 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 AC063952.2-201ENST00000498792 1227 ntBASIC16.49■□□□□ 0.23
RPS4XP62701 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4XP62701 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4XP62701 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4XP62701 AC009065.1-201ENST00000564055 1225 ntBASIC16.49■□□□□ 0.23
RPS4XP62701 AL512604.3-201ENST00000569583 964 ntBASIC16.49■□□□□ 0.23
RPS4XP62701 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.49■□□□□ 0.23
RPS4XP62701 AC112497.1-201ENST00000624824 639 ntBASIC16.49■□□□□ 0.23
RPS4XP62701 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4XP62701 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4XP62701 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms