Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 AC098831.1-202ENST00000438821 336 ntBASIC19.2■□□□□ 0.66
ERVFC1P60507 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.2■□□□□ 0.66
ERVFC1P60507 OR7E14P-202ENST00000530490 1290 ntBASIC19.2■□□□□ 0.66
ERVFC1P60507 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.2■□□□□ 0.66
ERVFC1P60507 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.2■□□□□ 0.66
ERVFC1P60507 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ERVFC1P60507 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.2■□□□□ 0.66
ERVFC1P60507 LINC01126-201ENST00000623515 1646 ntBASIC19.2■□□□□ 0.66
ERVFC1P60507 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ERVFC1P60507 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.2■□□□□ 0.66
ERVFC1P60507 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
ERVFC1P60507 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERVFC1P60507 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 AL356309.3-201ENST00000624132 1934 ntBASIC19.19■□□□□ 0.66
ERVFC1P60507 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ERVFC1P60507 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 HLA-J-201ENST00000462773 1622 ntBASIC19.19■□□□□ 0.66
ERVFC1P60507 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.19■□□□□ 0.66
ERVFC1P60507 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.19■□□□□ 0.66
ERVFC1P60507 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.19■□□□□ 0.66
ERVFC1P60507 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 AC025062.2-201ENST00000605477 670 ntBASIC19.19■□□□□ 0.66
ERVFC1P60507 AL691403.2-201ENST00000618460 490 ntBASIC19.19■□□□□ 0.66
ERVFC1P60507 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.19■□□□□ 0.66
ERVFC1P60507 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERVFC1P60507 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 AL499627.1-201ENST00000569373 2188 ntBASIC19.18■□□□□ 0.66
ERVFC1P60507 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.18■□□□□ 0.66
ERVFC1P60507 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ERVFC1P60507 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ERVFC1P60507 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 MED15P5-201ENST00000423150 992 ntBASIC19.18■□□□□ 0.66
ERVFC1P60507 RNA5SP415-201ENST00000517246 115 ntBASIC19.18■□□□□ 0.66
ERVFC1P60507 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.18■□□□□ 0.66
ERVFC1P60507 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.18■□□□□ 0.66
ERVFC1P60507 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ERVFC1P60507 FAM197Y3-203ENST00000618346 717 ntBASIC19.18■□□□□ 0.66
ERVFC1P60507 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.18■□□□□ 0.66
ERVFC1P60507 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.18■□□□□ 0.66
ERVFC1P60507 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.18■□□□□ 0.66
ERVFC1P60507 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
ERVFC1P60507 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERVFC1P60507 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ERVFC1P60507 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.17■□□□□ 0.66
ERVFC1P60507 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.17■□□□□ 0.66
ERVFC1P60507 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
ERVFC1P60507 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.17■□□□□ 0.66
ERVFC1P60507 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.17■□□□□ 0.66
ERVFC1P60507 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.17■□□□□ 0.66
ERVFC1P60507 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.17■□□□□ 0.66
ERVFC1P60507 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.17■□□□□ 0.66
ERVFC1P60507 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.17■□□□□ 0.66
ERVFC1P60507 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERVFC1P60507 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
ERVFC1P60507 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms