Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
FAM3BP58499 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 PCDH8P1-201ENST00000428983 2773 ntBASIC14.26□□□□□ -0.13
FAM3BP58499 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
FAM3BP58499 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
FAM3BP58499 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.26□□□□□ -0.13
FAM3BP58499 AC093787.1-201ENST00000450396 207 ntBASIC14.26□□□□□ -0.13
FAM3BP58499 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.26□□□□□ -0.13
FAM3BP58499 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 AL023806.1-201ENST00000603994 1649 ntBASIC14.26□□□□□ -0.13
FAM3BP58499 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM3BP58499 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM3BP58499 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.26□□□□□ -0.13
FAM3BP58499 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
FAM3BP58499 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 LSM12P1-201ENST00000411836 588 ntBASIC14.25□□□□□ -0.13
FAM3BP58499 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.25□□□□□ -0.13
FAM3BP58499 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
FAM3BP58499 CYP21A1P-202ENST00000354927 1481 ntBASIC14.25□□□□□ -0.13
FAM3BP58499 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FAM3BP58499 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FAM3BP58499 AP001094.4-201ENST00000579008 2176 ntBASIC14.24□□□□□ -0.13
FAM3BP58499 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
FAM3BP58499 AC104417.2-201ENST00000562989 1793 ntBASIC14.24□□□□□ -0.13
FAM3BP58499 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FAM3BP58499 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.24□□□□□ -0.13
FAM3BP58499 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms