Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC024563.2-201ENST00000603282 481 ntBASIC17.49■□□□□ 0.39
VSX2P58304 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.49■□□□□ 0.39
VSX2P58304 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.49■□□□□ 0.39
VSX2P58304 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
VSX2P58304 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VSX2P58304 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.48■□□□□ 0.39
VSX2P58304 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VSX2P58304 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.48■□□□□ 0.39
VSX2P58304 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.48■□□□□ 0.39
VSX2P58304 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.48■□□□□ 0.39
VSX2P58304 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.48■□□□□ 0.39
VSX2P58304 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.48■□□□□ 0.39
VSX2P58304 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
VSX2P58304 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.48■□□□□ 0.39
VSX2P58304 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VSX2P58304 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.48■□□□□ 0.39
VSX2P58304 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VSX2P58304 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VSX2P58304 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.47■□□□□ 0.39
VSX2P58304 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.47■□□□□ 0.39
VSX2P58304 AP003733.1-201ENST00000491725 852 ntBASIC17.47■□□□□ 0.39
VSX2P58304 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 AC011498.5-201ENST00000592027 486 ntBASIC17.47■□□□□ 0.39
VSX2P58304 AC093458.2-201ENST00000623150 629 ntBASIC17.47■□□□□ 0.39
VSX2P58304 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
VSX2P58304 WIZP1-201ENST00000531444 2299 ntBASIC17.47■□□□□ 0.39
VSX2P58304 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VSX2P58304 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VSX2P58304 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.46■□□□□ 0.39
VSX2P58304 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.46■□□□□ 0.39
VSX2P58304 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.46■□□□□ 0.39
VSX2P58304 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VSX2P58304 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms