Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RAB38P57729 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 FAM86EP-206ENST00000510506 987 ntBASIC17.17■□□□□ 0.34
RAB38P57729 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB38P57729 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB38P57729 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB38P57729 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB38P57729 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 PHGDH-209ENST00000641074 1780 ntBASIC17.16■□□□□ 0.34
RAB38P57729 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB38P57729 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB38P57729 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB38P57729 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB38P57729 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB38P57729 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB38P57729 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB38P57729 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB38P57729 BCL2-203ENST00000589955 5011 ntBASIC17.16■□□□□ 0.34
RAB38P57729 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB38P57729 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB38P57729 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 AC005332.1-201ENST00000577698 1310 ntBASIC17.16■□□□□ 0.34
RAB38P57729 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB38P57729 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB38P57729 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB38P57729 AC135776.1-201ENST00000319817 2481 ntBASIC17.15■□□□□ 0.34
RAB38P57729 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
RAB38P57729 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB38P57729 IGHGP-201ENST00000390555 1178 ntBASIC17.15■□□□□ 0.34
RAB38P57729 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB38P57729 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB38P57729 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB38P57729 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB38P57729 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB38P57729 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB38P57729 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms