Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H2P55055 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H2P55055 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.35■□□□□ 0.37
NR1H2P55055 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H2P55055 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H2P55055 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NR1H2P55055 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NR1H2P55055 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
NR1H2P55055 AC022211.2-201ENST00000585075 2527 ntBASIC17.35■□□□□ 0.37
NR1H2P55055 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 FEM1AP3-201ENST00000403722 1741 ntBASIC17.34■□□□□ 0.37
NR1H2P55055 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 AL353807.1-201ENST00000427475 662 ntBASIC17.34■□□□□ 0.37
NR1H2P55055 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.34■□□□□ 0.37
NR1H2P55055 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.34■□□□□ 0.37
NR1H2P55055 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NR1H2P55055 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.34■□□□□ 0.37
NR1H2P55055 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.34■□□□□ 0.37
NR1H2P55055 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.33■□□□□ 0.37
NR1H2P55055 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
NR1H2P55055 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NR1H2P55055 AC008894.3-201ENST00000624324 3103 ntBASIC17.33■□□□□ 0.37
NR1H2P55055 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NR1H2P55055 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NR1H2P55055 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.33■□□□□ 0.36
NR1H2P55055 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NR1H2P55055 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H2P55055 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.33■□□□□ 0.36
NR1H2P55055 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NR1H2P55055 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
NR1H2P55055 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms