Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 FGFR3P6-201ENST00000457012 610 ntBASIC15.89■□□□□ 0.13
HCFC1P51610 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.89■□□□□ 0.13
HCFC1P51610 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.89■□□□□ 0.13
HCFC1P51610 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.89■□□□□ 0.13
HCFC1P51610 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 AC004408.2-201ENST00000623613 2777 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HCFC1P51610 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 AL163051.1-201ENST00000569214 1512 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.88■□□□□ 0.13
HCFC1P51610 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HCFC1P51610 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 PMS2P7-201ENST00000506558 1336 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 HMGN1P19-201ENST00000436976 333 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 SART3-203ENST00000546611 1184 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.88■□□□□ 0.13
HCFC1P51610 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 MTDHP3-201ENST00000594186 672 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 AL049840.3-201ENST00000602669 611 ntBASIC15.88■□□□□ 0.13
HCFC1P51610 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.88■□□□□ 0.13
HCFC1P51610 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.88■□□□□ 0.13
HCFC1P51610 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.88■□□□□ 0.13
HCFC1P51610 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCFC1P51610 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.87■□□□□ 0.13
HCFC1P51610 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.87■□□□□ 0.13
HCFC1P51610 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.87■□□□□ 0.13
HCFC1P51610 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 RBM17P3-201ENST00000417687 1192 ntBASIC15.87■□□□□ 0.13
HCFC1P51610 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.87■□□□□ 0.13
HCFC1P51610 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.87■□□□□ 0.13
HCFC1P51610 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1P51610 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms