Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
LHX2P50458 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.29■□□□□ 0.2
LHX2P50458 AC012313.10-201ENST00000623509 926 ntBASIC16.29■□□□□ 0.2
LHX2P50458 LINC00602-201ENST00000629776 2065 ntBASIC16.29■□□□□ 0.2
LHX2P50458 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LHX2P50458 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LHX2P50458 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 AC233702.3-201ENST00000578656 1387 ntBASIC16.28■□□□□ 0.2
LHX2P50458 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
LHX2P50458 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 AL845331.1-201ENST00000424978 1190 ntBASIC16.28■□□□□ 0.2
LHX2P50458 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.28■□□□□ 0.2
LHX2P50458 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.28■□□□□ 0.2
LHX2P50458 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX2P50458 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
LHX2P50458 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX2P50458 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LHX2P50458 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LHX2P50458 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX2P50458 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LHX2P50458 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX2P50458 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.27■□□□□ 0.2
LHX2P50458 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LHX2P50458 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX2P50458 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LHX2P50458 KRT126P-201ENST00000549467 1181 ntBASIC16.27■□□□□ 0.2
LHX2P50458 AC012615.1-201ENST00000565797 1299 ntBASIC16.27■□□□□ 0.2
LHX2P50458 PRELID1P1-202ENST00000567272 903 ntBASIC16.27■□□□□ 0.2
LHX2P50458 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX2P50458 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX2P50458 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX2P50458 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX2P50458 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX2P50458 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX2P50458 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.27■□□□□ 0.19
LHX2P50458 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.27■□□□□ 0.19
LHX2P50458 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX2P50458 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX2P50458 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX2P50458 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LHX2P50458 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX2P50458 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LHX2P50458 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX2P50458 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX2P50458 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LHX2P50458 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LHX2P50458 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX2P50458 AC246785.2-201ENST00000432512 513 ntBASIC16.26■□□□□ 0.19
LHX2P50458 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX2P50458 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms