Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 COMP-202ENST00000425807 2292 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UBE2AP49459 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UBE2AP49459 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UBE2AP49459 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
UBE2AP49459 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
UBE2AP49459 UBE2SP1-201ENST00000450587 669 ntBASIC11.62□□□□□ -0.55
UBE2AP49459 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.62□□□□□ -0.55
UBE2AP49459 CD177P1-201ENST00000606252 935 ntBASIC11.62□□□□□ -0.55
UBE2AP49459 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UBE2AP49459 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UBE2AP49459 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
UBE2AP49459 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UBE2AP49459 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2AP49459 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
UBE2AP49459 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
UBE2AP49459 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 AL355355.2-201ENST00000442321 338 ntBASIC11.61□□□□□ -0.55
UBE2AP49459 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.61□□□□□ -0.55
UBE2AP49459 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.61□□□□□ -0.55
UBE2AP49459 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2AP49459 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.61□□□□□ -0.55
UBE2AP49459 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 FZD10-202ENST00000539839 3282 ntBASIC11.61□□□□□ -0.55
UBE2AP49459 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 HEIH-201ENST00000623091 1652 ntBASIC11.61□□□□□ -0.55
UBE2AP49459 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UBE2AP49459 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UBE2AP49459 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2AP49459 KRT8P3-201ENST00000519669 1449 ntBASIC11.6□□□□□ -0.55
UBE2AP49459 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2AP49459 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2AP49459 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2AP49459 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms